// @(#)root/tree:$Name: $:$Id: TBasket.cxx,v 1.20 2003/04/30 16:29:31 brun Exp $
// Author: Rene Brun 19/01/96
/*************************************************************************
* Copyright (C) 1995-2000, Rene Brun and Fons Rademakers. *
* All rights reserved. *
* *
* For the licensing terms see $ROOTSYS/LICENSE. *
* For the list of contributors see $ROOTSYS/README/CREDITS. *
*************************************************************************/
#include "TBasket.h"
#include "TTree.h"
#include "TBranch.h"
#include "TFile.h"
#include "TMath.h"
R__EXTERN TBranch *gBranch;
extern "C" void R__zip (Int_t cxlevel, Int_t *nin, char *bufin, Int_t *lout, char *bufout, Int_t *nout);
extern "C" void R__unzip(Int_t *nin, UChar_t *bufin, Int_t *lout, char *bufout, Int_t *nout);
const Int_t kMAXBUF = 0xffffff;
const UInt_t kDisplacementMask = 0xFF000000; // In the streamer the two highest bytes of
// the fEntryOffset are used to stored displacement.
ClassImp(TBasket)
//_______________________________________________________________________
//
// Manages buffers for branches of a Tree.
// See picture in TTree.
//
//_______________________________________________________________________
TBasket::TBasket()
{
// Default contructor
fDisplacement = 0;
fEntryOffset = 0;
fBufferRef = 0;
fBuffer = 0;
fHeaderOnly = kFALSE;
fBufferSize = 0;
fNevBufSize = 0;
fNevBuf = 0;
fLast = 0;
fBranch = 0;
}
//_______________________________________________________________________
TBasket::TBasket(const char *name, const char *title, TBranch *branch)
{
// Basket normal constructor
//
//
SetName(name);
SetTitle(title);
fClassName = "TBasket";
fBufferSize = branch->GetBasketSize();
fNevBufSize = branch->GetEntryOffsetLen();
fNevBuf = 0;
fEntryOffset = 0; //Must be set to 0 before calling Sizeof
fDisplacement= 0; //Must be set to 0 before calling Sizeof
fBuffer = 0; //Must be set to 0 before calling Sizeof
fBufferRef = new TBuffer(TBuffer::kWrite, fBufferSize);
if (branch->GetDirectory()) {
TFile *file = branch->GetFile();
fBufferRef->SetParent(file);
if (file && file->GetEND() > TFile::kStartBigFile) fVersion += 1000;
}
fHeaderOnly = kTRUE;
fLast = 0; // RDK: Must initialize before calling Streamer()
Streamer(*fBufferRef);
fKeylen = fBufferRef->Length();
fObjlen = fBufferSize - fKeylen;
fLast = fKeylen;
fBuffer = 0;
fBranch = branch;
fHeaderOnly = kFALSE;
if (fNevBufSize) fEntryOffset = new Int_t[fNevBufSize];
branch->GetTree()->IncrementTotalBuffers(fBufferSize);
}
//_______________________________________________________________________
TBasket::~TBasket()
{
// Basket destructor
//
if (fDisplacement) delete [] fDisplacement;
if (fEntryOffset) delete [] fEntryOffset;
// if (fBufferRef) delete fBufferRef; //this is done in the TKey destructor
// fBufferRef = 0;
fDisplacement= 0;
fEntryOffset = 0;
}
//_______________________________________________________________________
void TBasket::AdjustSize(Int_t newsize)
{
// Increase the size of the current fBuffer up to newsize
char *newbuf = TStorage::ReAllocChar(fBuffer,newsize,fBufferSize);
fBufferSize = newsize;
fBuffer = newbuf;
}
//_______________________________________________________________________
void TBasket::DeleteEntryOffset()
{
// delete fEntryOffset array
if (fEntryOffset) delete [] fEntryOffset;
fEntryOffset = 0;
fNevBufSize = 0;
}
//_______________________________________________________________________
Int_t TBasket::DropBuffers()
{
// Drop buffers of this basket if it is not the current basket
if (!fBuffer && !fBufferRef) return 0;
// delete [] fBuffer;
if (fDisplacement) delete [] fDisplacement;
if (fEntryOffset) delete [] fEntryOffset;
if (fBufferRef) delete fBufferRef;
fBufferRef = 0;
fBuffer = 0;
fDisplacement= 0;
fEntryOffset = 0;
fBranch->GetTree()->IncrementTotalBuffers(-fBufferSize);
return fBufferSize;
}
//_______________________________________________________________________
Int_t TBasket::GetEntryPointer(Int_t entry)
{
//*-*-*-*-*-*-*Get pointer to buffer for internal entry*-*-*-*-*-*
//*-* ========================================
Int_t offset;
if (fEntryOffset) offset = fEntryOffset[entry];
else offset = fKeylen + entry*fNevBufSize;
fBufferRef->SetBufferOffset(offset);
return offset;
}
//_______________________________________________________________________
Int_t TBasket::ReadBasketBuffers(Seek_t pos, Int_t len, TFile *file)
{
//*-*-*-*-*-*-*-*-*Read basket buffers in memory and cleanup*-*-*-*-*-*-*
//*-* =========================================
//
// Read a basket buffer. Check if buffers of previous ReadBasket
// should not be dropped. Remember, we keep buffers
// in memory up to fMaxVirtualSize.
Int_t badread= 0;
TDirectory *cursav = gDirectory;
fBranch->GetDirectory()->cd();
if (fBranch->GetTree()->MemoryFull(fBufferSize)) fBranch->DropBaskets();
fBufferRef = new TBuffer(TBuffer::kRead, len);
fBufferRef->SetParent(file);
char *buffer = fBufferRef->Buffer();
file->Seek(pos);
file->ReadBuffer(buffer,len);
Streamer(*fBufferRef);
if (fObjlen > fNbytes-fKeylen ||
(fObjlen==fNbytes-fKeylen
&& GetBranch()->GetCompressionLevel()!=0
&& file->GetVersion()<=30401)) {
if (TestBit(TBasket::kNotDecompressed) && (fNevBuf==1)) {
// By-passing buffer unzipping has been requested and is
// possible (only 1 entry in this basket).
fBuffer = fBufferRef->Buffer();
// Make sure that the buffer is set at the END of the data
fBufferRef->SetBufferOffset(fNbytes);
// Indicate that this buffer is weird.
fBufferRef->SetBit(TBasket::kNotDecompressed);
// Usage of this mode assume the existance of only ONE
// entry in this basket.
delete [] fEntryOffset; fEntryOffset = 0;
delete [] fDisplacement; fDisplacement = 0;
fBranch->GetTree()->IncrementTotalBuffers(fBufferSize);
return badread;
}
fBuffer = new char[fObjlen+fKeylen];
memcpy(fBuffer,buffer,fKeylen);
char *objbuf = fBuffer + fKeylen;
UChar_t *bufcur = (UChar_t *)&buffer[fKeylen];
Int_t nin, nout, nbuf;
Int_t noutot = 0;
while (1) {
nin = 9 + ((Int_t)bufcur[3] | ((Int_t)bufcur[4] << 8) | ((Int_t)bufcur[5] << 16));
nbuf = (Int_t)bufcur[6] | ((Int_t)bufcur[7] << 8) | ((Int_t)bufcur[8] << 16);
R__unzip(&nin, bufcur, &nbuf, objbuf, &nout);
if (!nout) break;
noutot += nout;
if (noutot >= fObjlen) break;
bufcur += nin;
objbuf += nout;
}
if (noutot != fObjlen) {
Error("ReadBasketBuffers", "fNbytes = %d, fKeylen = %d, fObjlen = %d, noutot = %d, nout=%d, nin=%d, nbuf=%d", fNbytes,fKeylen,fObjlen, noutot,nout,nin,nbuf);
badread = 1;
}
fBufferRef->SetBuffer(fBuffer, fObjlen+fKeylen );
} else {
fBuffer = fBufferRef->Buffer();
}
cursav->cd();
fBranch->GetTree()->IncrementTotalBuffers(fBufferSize);
// read offsets table
if (!fBranch->GetEntryOffsetLen()) return badread;
delete [] fEntryOffset;
fEntryOffset = 0;
fBufferRef->SetBufferOffset(fLast);
fBufferRef->ReadArray(fEntryOffset);
if (!fEntryOffset) {
fEntryOffset = new Int_t[fNevBuf+1];
fEntryOffset[0] = fKeylen;
Warning("ReadBasketBuffers","basket:%s has fNevBuf=%d, but fEntryOffset=0, trying to repair",GetName(),fNevBuf);
return badread;
}
delete [] fDisplacement;
fDisplacement = 0;
if (fBufferRef->Length() != fBufferRef->BufferSize()) {
// There is more data in the buffer! It is the displacement
// array.
fBufferRef->ReadArray(fDisplacement);
}
return badread;
}
//_______________________________________________________________________
Int_t TBasket::ReadBasketBytes(Seek_t pos, TFile *file)
{
//*-*-*-*-*-*-*-*-*Read basket buffers in memory and cleanup*-*-*-*-*-*-*
//*-* =========================================
//
// Read first bytes of a logical record starting at position pos
// return record length (first 4 bytes of record)
const Int_t len = 128;
char buffer[len];
Int_t keylen;
file->GetRecordHeader(buffer, pos,len, fNbytes, fObjlen, keylen);
fKeylen = keylen;
return fNbytes;
}
//_______________________________________________________________________
void TBasket::SetReadMode()
{
// Set read mode of basket.
fLast = fBufferRef->Length();
fBufferRef->SetReadMode();
}
//_______________________________________________________________________
void TBasket::SetWriteMode()
{
// Set write mode of basket.
fBufferRef->SetWriteMode();
fBufferRef->SetBufferOffset(fLast);
}
//_______________________________________________________________________
void TBasket::Streamer(TBuffer &b)
{
//*-*-*-*-*-*-*-*-*Stream a class object*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
//*-* =========================================
char flag;
if (b.IsReading()) {
fBranch = gBranch;
TKey::Streamer(b); //this must be first
Version_t v = b.ReadVersion();
b >> fBufferSize;
b >> fNevBufSize;
b >> fNevBuf;
b >> fLast;
b >> flag;
if (fLast > fBufferSize) fBufferSize = fLast;
if (!flag) return;
if (flag%10 != 2) {
delete [] fEntryOffset;
fEntryOffset = new Int_t[fNevBufSize];
if (fNevBuf) b.ReadArray(fEntryOffset);
if (20<flag && flag<40) {
for(int i=0; i<fNevBuf; i++){
fEntryOffset[i] &= ~kDisplacementMask;
}
}
if (flag>40) {
fDisplacement = new Int_t[fNevBufSize];
b.ReadArray(fDisplacement);
}
}
if (flag == 1 || flag > 10) {
fBufferRef = new TBuffer(TBuffer::kRead,fBufferSize);
fBufferRef->SetParent(gDirectory->GetFile());
char *buf = fBufferRef->Buffer();
if (v > 1) b.ReadFastArray(buf,fLast);
else b.ReadArray(buf);
fBufferRef->SetBufferOffset(fLast);
fBranch->GetTree()->IncrementTotalBuffers(fBufferSize);
}
} else {
TKey::Streamer(b); //this must be first
b.WriteVersion(TBasket::IsA());
Int_t curLast = fBufferRef->Length();
if (fBufferRef && !fHeaderOnly && !fSeekKey && curLast > fLast) fLast = curLast;
if (fLast > fBufferSize) fBufferSize = fLast;
b << fBufferSize;
b << fNevBufSize;
b << fNevBuf;
b << fLast;
flag = 1;
if (!fEntryOffset) flag = 2;
if (fBufferRef) flag += 10;
if (fDisplacement) flag += 40;
if (fHeaderOnly) flag = 0;
b << flag;
if (fHeaderOnly) return;
if (fEntryOffset && fNevBuf) {
b.WriteArray(fEntryOffset, fNevBuf);
if (fDisplacement) b.WriteArray(fDisplacement, fNevBuf);
}
if (fBufferRef) {
char *buf = fBufferRef->Buffer();
b.WriteFastArray(buf, fLast);
}
}
}
//_______________________________________________________________________
void TBasket::Update(Int_t offset, Int_t skipped)
{
// Update basket header and EntryOffset table
if (fEntryOffset) {
if (fNevBuf+1 >= fNevBufSize) {
Int_t newsize = TMath::Max(10,2*fNevBufSize);
Int_t *newoff = TStorage::ReAllocInt(fEntryOffset, newsize,
fNevBufSize);
if (fDisplacement) {
Int_t *newdisp = TStorage::ReAllocInt(fDisplacement, newsize,
fNevBufSize);
fDisplacement = newdisp;
}
fEntryOffset = newoff;
fNevBufSize = newsize;
//Update branch only for the first 10 baskets
if (fBranch->GetWriteBasket() < 10) fBranch->SetEntryOffsetLen(newsize);
}
fEntryOffset[fNevBuf] = offset;
if (skipped!=offset && !fDisplacement){
fDisplacement = new Int_t[fNevBufSize];
for (Int_t i = 0; i<fNevBufSize; i++) fDisplacement[i] = fEntryOffset[i];
}
if (fDisplacement) {
fDisplacement[fNevBuf] = skipped;
fBufferRef->SetBufferDisplacement(skipped);
}
}
fNevBuf++;
}
//_______________________________________________________________________
Int_t TBasket::WriteBuffer()
{
// Write buffer of this basket on the current file
const Int_t kWrite = 1;
TDirectory *cursav = gDirectory;
TFile *file = fBranch->GetFile(kWrite);
if (!file) return 0;
fBranch->GetDirectory()->cd();
if (!file->IsWritable()) { cursav->cd(); return 0;}
if (fBufferRef->TestBit(TBasket::kNotDecompressed)) {
// Read the basket information that was saved inside the buffer.
Bool_t writing = fBufferRef->IsWriting();
fBufferRef->SetReadMode();
fBufferRef->SetBufferOffset(0);
Streamer(*fBufferRef);
if (writing) fBufferRef->SetWriteMode();
Int_t nout = fNbytes - fKeylen;
fBuffer = fBufferRef->Buffer();
Create(nout);
fBufferRef->SetBufferOffset(0);
fHeaderOnly = kTRUE;
Streamer(*fBufferRef); //write key itself again
TKey::WriteFile(0);
fHeaderOnly = kFALSE;
cursav->cd();
return fKeylen+nout;
}
//*-*- Transfer fEntryOffset table at the end of fBuffer. Offsets to fBuffer
// are transformed in entry length to optimize compression algorithm.
fLast = fBufferRef->Length();
if (fEntryOffset) {
fBufferRef->WriteArray(fEntryOffset,fNevBuf+1);
delete [] fEntryOffset; fEntryOffset = 0;
if (fDisplacement) {
fBufferRef->WriteArray(fDisplacement,fNevBuf+1);
delete [] fDisplacement; fDisplacement = 0;
}
}
Int_t lbuf, nout, noutot, bufmax, nzip;
lbuf = fBufferRef->Length();
fObjlen = lbuf - fKeylen;
fHeaderOnly = kTRUE;
fCycle = fBranch->GetWriteBasket();
Int_t cxlevel = fBranch->GetCompressionLevel();
if (cxlevel > 0) {
if (cxlevel == 2) cxlevel--;
Int_t nbuffers = fObjlen/kMAXBUF;
Int_t buflen = fKeylen + fObjlen + 28; //add 28 bytes in case object is placed in a deleted gap
fBuffer = new char[buflen];
char *objbuf = fBufferRef->Buffer() + fKeylen;
char *bufcur = &fBuffer[fKeylen];
noutot = 0;
nzip = 0;
for (Int_t i=0;i<=nbuffers;i++) {
if (i == nbuffers) bufmax = fObjlen -nzip;
else bufmax = kMAXBUF;
R__zip(cxlevel, &bufmax, objbuf, &bufmax, bufcur, &nout);
if (nout == 0 || nout == fObjlen) { //this happens when the buffer cannot be compressed
fBuffer = fBufferRef->Buffer();
Create(fObjlen);
fBufferRef->SetBufferOffset(0);
Streamer(*fBufferRef); //write key itself again
//Warning("WriteBuffer","Found pathological case where buffer cannot be compressed. Result is OK. fNbytes=%d, fObjLen=%d, fKeylen=%d",fNbytes,fObjlen,fKeylen);
goto WriteFile;
}
bufcur += nout;
noutot += nout;
objbuf += kMAXBUF;
nzip += kMAXBUF;
}
nout = noutot;
Create(noutot);
fBufferRef->SetBufferOffset(0);
Streamer(*fBufferRef); //write key itself again
memcpy(fBuffer,fBufferRef->Buffer(),fKeylen);
delete fBufferRef; fBufferRef = 0;
} else {
fBuffer = fBufferRef->Buffer();
Create(fObjlen);
fBufferRef->SetBufferOffset(0);
Streamer(*fBufferRef); //write key itself again
nout = fObjlen;
}
// TKey::WriteFile calls FillBuffer. TBasket inherits from TKey, hence
// TBasket::FillBuffer is called.
WriteFile:
TKey::WriteFile(0);
fHeaderOnly = kFALSE;
cursav->cd();
return fKeylen+nout;
}
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